Tutorial


Water Buffalo Mastitis database (WBMSTDb) has developed for the purpose of addressing matitis related information. the database has been categoried in six different tabs i.e Home, Search(Gene, Gene Annotation, Protein, Protein-Protein Interaction), SNP, Pathways,Tutorial and Team.This website is available on http://webtom.cabgrid.res.in/wbmstdb/

Perl Script available for Download

Home: Home tab contains the brief introduction, Purpose and mathods used in database.

Protein: Protein tab provides the information regarding protein's name, length accession.

Gene information: this tab contains the various information related to gene i.e gene name, Id, description,Chromosome number,5'UTR&3'UTR and literature reference.

Gene annotation: This page includes Gene name, Id, species,biological process, cellular component, molecular function,Interpro, SuperFanmily,SMART and Up Keyword related information.

1st_interaction: This page includes closely protein-protein interaction information such as node1, node2, co-expression,experimentally determined interaction,Databse Annotation,auto-text mining and combined score.

Other_interaction: This page deals distant protein-protein interaction information such as node1, node2, co-expression,experimentally determined interaction,Databse Annotation,auto-text mining and combined score.

Funct_AnnotationThis page contains the information about the ProteinId, Description,Gene Observed Count,Gene Background Count,False Discovery Rate,Matched PoteinID and Database.

SNP:SNP tab deals information of different varients like gene name,Id,chromosone, start&end position , orientation and total numbers of SNPs & InDels.

Pathways:Pathways tab provides the information of all pathways involved in water buffalo.

Tutorial: Tutorial page deals the guidence for getting the information from this database.

Team: This page contains the member's name who have contributed in development of this database.